Description
Draws a vertical barplot of cell-types proportions.
Usage
propplot(x, col = NULL, legend.text = TRUE, scale = FALSE, legwidth = 10, ...)
Arguments
- x
- data. Can be a matrix with cell types in rows
and samples in columns, or an
NMF-class
object that contains proportions as its mixture
coefficient matrix, e.g. as computed by
ged.
- col
- color specification
- legend.text
- logical that indicates if a legend
should be added to the plot, or the text of the legend as
in
barplot.
- scale
- logical that indicates if the data should be
scaled so that columns sum up to one, like proportions.
- legwidth
- number of margin lines left to display
the legend in the plot margin.
- ...
- extra arguments passed to
barplot.