CellMix access key: TIGER
Marker list created from the TIGER
dataset
(Liu et al. (2008)). The TiGER database is based
on UniGene EST distribution profiles. The markers are
defined by thresholds on enrichment scores and their
associated log10 p-values.
.mTIGER(score = 5, log10P = 3.47853)
The MarkerList
object is generated by the internal
function .mTIGER
, to which arguments can be passed
via MarkerList('TIGER', ...)
to build lists using
different filtering threshold.
The function convertIDs
can be used to
convert the primary identifiers into other identifiers
(e.g. ENTREZ ids or microarray probe ids), using
up-to-date mappings from Bioconductor annotation
packages.
Liu X, Yu X, Zack DJ, Zhu H and Qian J (2008). "TiGER: a
database for tissue-specific gene expression and
regulation." _BMC bioinformatics_, *9*, pp. 271. ISSN
1471-2105,