is.probeid. CellMix 1.6

Description

is.probeid tells if given IDs are probe IDs.

is.probetype tells if given types are probe ID types.

is.idtype tells if a given character vector contains valid types.

asGeneIdentifierType is similar to idtype, but returns an object of class GeneIdentifierType-class, for use in GeneSet-class objects.

is.probeid(x, ...)

is.probetype(type)

is.idtype(type)

asGeneIdentifierType(x, limit = NULL, annotation = NULL, error = NullIdentifier(annotation))

x: an R object
...: extra arguments passed to idtype.
type: an identifier type as returned by idtype.
annotation: annotation package to associate with the returned GeneIdentifierType-class object.
error: specifies what to do if the type of x cannot be determined For asGeneIdentifierType, all arguments in ... are used in an internal call to idtype.
limit: specification for limiting which elements are used to detect the type of identifiers. If a single numeric, then only the first limit elements are used. Otherwise it must be a subsetting logical or numeric vector.