NMFged-package |
Semi-Supervised Nonnegative Matrix Factorization for Gene Expression Deconvolution |
"toto,NMF,ANY-method" |
Annotated Heatmap of NMF Basis Components |
attachMarkers |
Utility Class and Methods for Handling Marker Lists |
basismarker |
Annotated Heatmap of NMF Basis Components |
curated.probes |
Marker Probesets from Abbas et al. |
enforceMarkers |
Enforcing Marker Block Patterns |
enforceMarkers-method |
Enforcing Marker Block Patterns |
extractMarkers |
Extracting Marker Features from Pure Samples. |
extractMarkers-method |
Extracting Marker Features from Pure Samples. |
getMarkers |
Utility Class and Methods for Handling Marker Lists |
GSE11058.basis |
Reference NMF Model for the Dataset GSE11058 |
GSE11058.coef |
Reference NMF Model for the Dataset GSE11058 |
has.markers |
Utility Class and Methods for Handling Marker Lists |
markerIndex |
Utility Class and Methods for Handling Marker Lists |
markerIndex-method |
Utility Class and Methods for Handling Marker Lists |
MarkerList |
Utility Class and Methods for Handling Marker Lists |
MarkerList-class |
Utility Class and Methods for Handling Marker Lists |
markermap |
Plotting Functions for MarkerList Objects |
markermap-method |
Plotting Functions for MarkerList Objects |
markerStatstoList |
Extracting Marker Features from Pure Samples. |
match.nmf |
Assigning Estimated Signature to Real Cell-Types |
nmark |
Utility Class and Methods for Handling Marker Lists |
nmark-method |
Utility Class and Methods for Handling Marker Lists |
NMFged |
Semi-Supervised Nonnegative Matrix Factorization for Gene Expression Deconvolution |
plotMarkers |
Plotting Functions for MarkerList Objects |
rev |
Utility Class and Methods for Handling Marker Lists |
subset |
Utility Class and Methods for Handling Marker Lists |
subset-method |
Utility Class and Methods for Handling Marker Lists |
summary |
Utility Class and Methods for Handling Marker Lists |
summary-method |
Utility Class and Methods for Handling Marker Lists |